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- Cyanophyceae 2
- Cyanophyta 3
- Cyathura carinata 1
- Cyclophora maderensis 1
- Cyclophora maderensis lundbladi 1
- Cyclophora maderensis maderensis 1
- Cyclophora puppillaria 1
- Cyclopidae 1
- Cyclorrhapha 5
- Cyclothone parapallida 1
- Cydia pomonella 1
- Cygnus olor 1
- Cylindroiulus 1
- Cylindroiulus madeirae 1
- Cymatium martinianum 1
- Cymodocea nodosa 1
- Cymoptus vieirai 1
- Cynareae 1
- Cynipoidea 3
- Cyphocleonus aguiari 1