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- Curculionidae 11
- Curculionoidea 1
- Curral das Freiras 1
- Cuscuta campestris 1
- Cyanobacteria 1
- Cyanophyceae 2
- Cyanophyta 3
- Cyathura carinata 1
- Cyclophora maderensis 1
- Cyclophora maderensis lundbladi 1
- Cyclophora maderensis maderensis 1
- Cyclophora puppillaria 1
- Cyclopidae 1
- Cyclorrhapha 5
- Cyclothone parapallida 1
- Cydia pomonella 1
- Cygnus olor 1
- Cylindroiulus 1
- Cylindroiulus madeirae 1
- Cymatium martinianum 1